From the station track on the east side at the Savannah Amtrak station (MP 490.9 on the former ACL route), which has a stub track and its side platform on the east side, two through tracks surrounding an island platform with an umbrella shed on the west side, with the modern station building to the east, which once used a passenger subway to connect to the island platform, and two through tracks on the east side, south of the platform, trailing in to the track west of the platform which then trails into the east side of the main line, the line passes Telfair Junction, where parallel routes through Savannah (one ex-SAL, on the west side, and one ex-ACL on the east side) separate at MP 491.4 (on the ex-ACL), and an SAL line once curved away on the east side, with the main lines crossing the Georgia Central Railroad on the flat just south of the junction as they separate (Alabama Junction, MP 491.7, on the ex-ACL, and Savannah Yard, MP 500.1, on the ex-SAL).
The double track, CTC, former ACL "East Side"line heads south-southeast, with speed limit 50 mph, past a wye on the west side with a connector over to the single track ex-SAL line, a former flat crossing with an erstwhile SAL line, MP 493.5 to MP 493.9, where the speed limit is 40 mph before returning to 50 mph, MP 494.5, where the speed limit drops to 30 mph, a curve south-southwest at Union Junction, where an ACL line once trailed in from the northeast, North Tower (MP 494.8), where the overall speed limit rises to 79 mph for passenger trains, 70 mph for intermodal trains, and 60 mph for freight trains and local restrictions end, and Southover (MP 496.0), where a line from the Marine Terminal trails in from the northeast as the line turns southwest.
Southover Yard is on the west side from Southover to DA (MP 497.3), and the line then passes Grubbs (MP 498.0), where there is a north-facing spur, Forest River (MP 499.3), where the line is single track across the bridge over the eponymous river, MP 500.0, where Yard Limits end and the Forest River Block starts, MP 502.9, where the Forest River Block ends and the Gator Block starts, and Burroughs (MP 503.1 on the ex-ACL), where the former SAL line trails back in on the west side.
The single track, CTC, former SAL "West Side" line heads south from its MP 499.9, with speed limit 20 mph on the turnout and over the flat crossing at MP 500.1, which has connectors in both the southeast and southwest quadrants, past MP 500.3, where the speed limit rises to 45 mph, a wye on the east side with a connector over to the former ACL "East Side" line, the five-track Savannah Yard along the east side of the line, a detector at MP 501.8, MP 501.9, where full line speeds of 79/70/60 are reached and the line turns southwest where an SAL line once trailed in from the northeast (and a track still trails in on that side), Blossom (MP 502.4), where double track starts, crossovers at South Blossom (MP 503.9), MP 504.1, where Yard Limits end and the Anderson Block starts, a grade crossing, MP 509.3, where the line returns to single track and the speed limit falls to 45 mph for a deck girder bridges over a river in the marshes, a dirt road grade crossing, a deck girder bridge over a river in the marshes, and the junction in the woods at Burroughs (MP 509.6), where the Anderson Block ends before trailing back into the former ACL line at its MP 503.1.
South of Savannah, all trains today use the former ACL line to Jacksonville, heading southwest, on the double track, CTC, 79/70/60 line south of Burroughs, past a short stretch of single track over a river bridge, Ogeechee (MP 506.0), where the Riceboro Branch (the erstwhile SAL main line) heads off on the east side (MP 505.9), the Gator Block ends and the Richmond Hill Block starts, South Ogeechee (MP 510.0), where double track and the Richmond Hill Block ends and the Ogeechee Block starts, Daniel, a grade crossing and detector at MP 512.0, a grade crossing, Intermediate Signals at Fleming, a grade crossing, Lodge (MP 518.0), where double track resumes, the Ogeechee Block ends and the Lodge Block starts, and the passenger speed limit falls to 70 mph on Track 1 (to the west), a grade crossing just south of the start of double track, a bridge over a marsh, Intermediate Signals at MP 520.5, extra track to the east, a road bridge overhead, McIntosh (MP 522.8), where single track starts again, the Lodge Block ends and the McIntosh Block starts, and full line speeds resume, a bridge over a stream, a dirt road grade crossing, and Intermediate Signals at Allenhurst.
A line from Camp Stewart trails in from the north (i.e. on the west side) at Walthourville (MP 528.8), and the main line continues southwest, past a grade crossing, a detector at MP 530.0, Intermediate Signals at 'Lewisville', North Ludowici (MP 533.3), where double track resumes, the McIntosh Block ends and the Ludowici Block starts, a dirt road grade crossing, Ludowici (MP 537.6), where a Georgia Coast & Piedmont line once crossed on the flat, Intermediate Signals, two grade crossings in town, a spur to the west, a bridge over the swamp, Back Swamp (MP 540.1), where single track starts again (MP 540.0), the Ludowici Block ends and the Morgan Block starts, Intermediate Signals, a dirt road grade crossing, two bridges over the swamp, MP 543.5 to MP 543.6, where the speed limit is 50 mph, a deck girder bridge over a river,the 4,504 ft. siding on the east side at Doctortown (MP 543.7), where double track resumes (MP 543.9), the Morgan Block ends and the Doctortown Block starts, and a spur from a Rayonier plant trails in from the north (i.e. on the west side), Intermediate Signals at 'McMillan', MP 547.3, where the speed limit falls to 50 mph through town, an NS line bridging overhead, with connectors in the south and west quadrants, two grade crossings and Jesup (MP 548.2), where the Jesup subdivision to Waycross heads away (straight ahead) on the west side while the main line turns just west of due south.